PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC206951.3_FGP017
Common NameEREB182, LOC100281138
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 306aa    MW: 33108.2 Da    PI: 4.4962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC206951.3_FGP017genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-1991140255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+W+AeIrdp+    +  r++lg+f +ae Aa+a+++a++ ++g
  AC206951.3_FGP017  91 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPSAEAAARAYDHAARGIRG 140
                        69*******.**********75....44**********************98887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.16E-1890147No hitNo description
SMARTSM003801.6E-3791154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-3291150IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-2291149IPR016177DNA-binding domain
PROSITE profilePS5103224.57991148IPR001471AP2/ERF domain
PfamPF008471.7E-1192140IPR001471AP2/ERF domain
PRINTSPR003671.2E-1092103IPR001471AP2/ERF domain
PRINTSPR003671.2E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MCGGAILAEL IPTTPARRGG AAWPAGKCKR RKANDFEAAF REFDEDSEEE EEDEGVVESK  60
PAFVVRASSA ATQPRARQEQ RSRRRAPDQQ QYRGVRRRPW GKWAAEIRDP VKGVRVWLGT  120
FPSAEAAARA YDHAARGIRG PRAKLNFPSS SSSAAGAPAS RKRARTADAD AVIDLEEQEQ  180
RPAAAALKHE AAECSGSDAL PDFSWQGVSA AYDEPPAPRP AFDFEARPES AADEASPRAS  240
DSESDALFDS LLFGDQFAFF DAGAYESLDS LFSADAVQSN AAAAADQDMP LWSFDDGCLV  300
EDNLSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2090154469ATERF1
3gcc_A4e-2090154469ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.386450.0cell culture| ear| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC206951.3_FG017
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC206951.3_FGP017
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0685510.0BT068551.1 Zea mays full-length cDNA clone ZM_BFb0310P02 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147529.11e-160ethylene-responsive element binding protein 2
TrEMBLC0PJT20.0C0PJT2_MAIZE; AP2-EREBP transcription factor
STRINGAC206951.3_FGP0170.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43712654
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.11e-20ERF family protein